Job Description P0A6L4 Confidence 85.56% Date Thu Jan 5 11:03:26 GMT 2012 Rank 224 Aligned Residues 212 % Identity 16% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																												.	.	.	.	.	.	.	.	.																						.
Query Sequence		V	M	A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	.	.	.	.	.	.	.	.	.	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	.	K	G	K	I	K	L	I
Query Conservation																																												.	.	.	.	.	.	.	.	.																						.
Alig confidence																												.	.					.										.	.	.	.	.	.	.	.	.																						.
Template Conservation																												.	.					.
Template Sequence		V	L	A	P	L	T	R	Q	R	S	Y	G	N	V	P	Q	P	H	A	A	I	Y	Y	S	Q	R	.	.	T	T	P	G	.	G	F	L	I	T	E	A	T	G	V	S	D	T	A	Q	G	Y	Q	D	T	P	G	I	W	T	K	E	H	V	E	A	W	K	P	I	V	D	A	V	H	A	K	G	G	I	F	F
Template Known Secondary structure											S	G	G	G													T	.	.			T	T	.						S				S	S	T	T				S	T	T			B		S	S																	T	T
Template Predicted Secondary structure																												.	.					.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		78	.	80	.	.	.	.																																																			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		A	H	V	G	C	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	.	.
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		C	Q	I	W	H	V	G	R	V	S	N	S	G	F	Q	P	N	G	K	A	P	I	S	C	S	D	K	P	L	M	P	Q	I	R	S	N	G	I	D	E	A	L	F	T	P	P	R	R	L	G	I	E	E	I	P	G	I	V	N	D	F	R	L	A	A	R	N	A	M	E	A	G	F	D	G	V	E	I	H	G
Template Known Secondary structure								T	T	S	S		G	G	G	S	G	G	G						S	S				S		T	T		B		S	S	S	S	S	B	S	S								G	G	G	S																		T		S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
											106	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.											.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.											.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	T	P	F	Y	Y	P	F	S	F	E	E	.	.	.	.	.	.	.	.	.	.	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	.	.	.	.	A	L	S	G	V	K	L	T	L	D	.	.	.	Q	I	N	T	L	V	T	L	P
Query Conservation		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																								.	.	.	.											.	.	.
Template Conservation
Template Sequence		A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	V	G	I	R	L	S	P	F	A	D	Y	M	E	S	G	D	T	N	P	G	A	L	G	L	Y	M	A	E	S	L	N	K	Y
Template Known Secondary structure			T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T			T	T	T				S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																.	.													.													.
Query SS confidence																																.	.													.													.
Query Sequence		G	V	G	A	L	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	.	A	D	G	G	I	G	S	T	Y	N	I	M	.	G	W	R	Y	Q	G	I	V	K
Query Conservation																																.	.													.													.
Alig confidence																																.	.													.													.
Template Conservation
Template Sequence		G	I	L	Y	C	H	V	I	E	A	R	M	H	T	L	M	P	M	R	K	A	F	K	G	T	F	I	S	A	G	G	F	T	R	E	D	G	N	E	A	V	S	K	G	R	T	D	L	V	A	Y	G	R	W	F	L	A	N	P	D	L	P	K	R	F	Q	V
Template Known Secondary structure		T		S																					S						S	S												T	T	S		S					S							T	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions