 |
Job Description | P0A6L4 | Confidence | 89.10% | Date | Thu Jan 5 11:03:26 GMT 2012 |
Rank | 194 | Aligned Residues | 71 |
% Identity | 20% | Template | d1vbga1 |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| Pyruvate phosphate dikinase, C-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
. | . | . | . | . | . | 110 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
E | R | E | Q | V | L | E | I | V | A | E | E | A | K | G | K | I | K | L | I | A | H | V | G | C | V | S | T | A | E | S | Q | Q | L | A | A | S | A | K | R | Y | G | F | D | A | V | . |
S | A | V | T | P | F | Y | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | F | S | F | E | E | . |
. |
. |
. |
Query Conservation |   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
| . |
|
|   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |
| . | . |   |
|   |
|   |
|
|
|   |   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
Template Sequence |   |
D | L | G | T | F | M | A | W | V | D | D | V | R | . |
. |
K | L | K | V | L | A | N | A | D | T | P | . |
. |
. |
. |
. |
. |
D | D | A | L | T | A | R | N | N | G | A | Q | G | I | G | L | C | R | T | E | H | M | F | F | A | S | D | E | R | I | K | A | V | R | Q | M | I | M | A | P | T | L | E | L | R | Q | Q | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
| S |  |  |  |  |  |
| S | S |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
523 | . | . | . | . | . | . | 530 | . | . | . | . | . | |
|
. | . | . | . | 540 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
H | C | D | H | Y | R | A | I | I | D | S | A | D | G | L | P | M | V | V |
Query Conservation |   |
. | . | . | . | . | . | . |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|
|   |
|
Template Sequence |   |
L | D | R | L | L | P | Y | Q | R | S | D | F | E | G | I | F | R | A | M | D | G | L | P | V | T | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
595 | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|