Job Description P0A6L4 Confidence 94.22% Date Thu Jan 5 11:03:26 GMT 2012 Rank 121 Aligned Residues 191 % Identity 18% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.						.	.	.	.	.
Template Conservation																																																																						.	.
Template Sequence		G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M	L	R	E	V	T	P	E	L	S	.	.	C	P	V	V	L	L	S	Y	Y	K
Template Known Secondary structure		T	S	S															T	T		S	S								S			T	T	S													T	T	T														G	G	G		S	.	.	S								S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.
																				79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		P	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	L	P	Y	V	A	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	T	P	A	I	P	.	.	.	.	.	.	.	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y	L	V	S	V	N	G
Template Known Secondary structure					S			T						T	T							T	T			T	T	T											T	T									T	T	S		.	.	.	.	.	.	.													S							S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																												.								.	.
Query SS confidence																																												.								.	.
Query Sequence		A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	L	P	G	V	G	A	L	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	.	D	L	V	L	Y	N	G	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y
Query Conservation																																												.								.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.								.	.																						.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Sequence		V	T	G	P	R	A	N	V	N	P	R	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	I	Q	E	V	K	K	V	T	N	K	P	V	A	V	G	F	G	I	S	K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	.	.	.	.	.	.	.
Template Known Secondary structure			B		T	T	S		B		T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S						S				S										T	T		S								.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190																			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	.	.	A	Q	K	L	Q	T	E	C	N	K	V	I	D	L	L
Query Conservation																.	.
Alig confidence		.	.													.	.
Template Conservation		.	.
Template Sequence		.	.	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R	L	E	E	Y	A	R	G	M	K	N	A	L
Template Known Secondary structure		.	.							S	S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions