 |
Job Description | P0A6L4 | Confidence | 36.95% | Date | Thu Jan 5 11:03:26 GMT 2012 |
Rank | 455 | Aligned Residues | 113 |
% Identity | 14% | Template | d1muwa_ |
SCOP info | TIM beta/alpha-barrel
| Xylose isomerase-like
| Xylose isomerase
|
Resolution | 0.86 |
|
 |
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | P | F | D | Q | Q | Q | A | L | D | K | A | S | L | R | R | L | V | Q | F | N | I | Q | Q | G | I | D | G | L | Y | V | G | G | . |
. |
. |
. |
. |
. |
. |
. |
S | T | G | E | A | F | V | Q | S | L | S | E | R | E | . |
. |
. |
. |
. |
. |
. |
Q | V | L | E | I | V | A | E | E | A | K | G | K | I | K | L | I |
Query Conservation |   |
  |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
| . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |
|
|   |
|
|
|   | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|   |   |
|
|
|   |   |
|
|
|
|
Template Sequence |   |
L | I | P | F | G | S | S | D | T | E | R | E | S | H | I | K | R | F | R | Q | A | L | D | A | T | G | M | T | V | P | M | A | T | T | N | L | F | T | H | P | V | F | K | D | G | G | F | T | A | N | D | R | D | V | R | R | Y | A | L | R | K | T | I | R | N | I | D | L | A | V | E | L | G | A | K | T | Y | V | A | W |
Template Known Secondary structure |   |
 | S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
|
|  |  |  |
|
|
| S | S | S | G | G | G | T | T |
| S | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
  |   |
78 | . | |
|
|
|
|
|
80 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | H | . |
. |
. |
. |
. |
. |
V | G | C | V | S | . |
. |
. |
. |
. |
. |
. |
. |
T | A | E | S | Q | Q | L | A | A | S | A | K | R | Y | G | F | D | A | V | S | A | V | T | P | . |
. |
. |
. |
. |
. |
. |
F | Y | Y | P | F | S | F | E | E | H | C | D | H | Y | R | A | I |
Query Conservation |   |
  |
| . | . | . | . | . | . |
|   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |
| . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
| . | . | . | . | . | . |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|   |
|   |
|   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|
Template Sequence |   |
G | G | R | E | G | A | E | S | G | A | A | K | D | V | R | V | A | L | D | R | M | K | E | A | F | D | L | L | G | E | Y | V | T | S | Q | G | Y | D | I | R | F | A | I | E | P | K | P | N | E | P | R | G | D | I | L | L | P | T | V | G | H | A | L | A | F | I | E | R | L |
Template Known Secondary structure |   |
| T | T |
|  |  | S | S | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |
|
|
| S | S | S | S | S | S |  |  | S | S |
| S |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|