Job Description P0A6L4 Confidence 88.31% Date Thu Jan 5 11:03:26 GMT 2012 Rank 200 Aligned Residues 135 % Identity 17% Template d1djqa1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.20

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																						.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																						.	.	.	.
Query Sequence		K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	L	S	E	R	.	.	.	.	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																						.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		Q	Q	F	Y	V	D	A	A	K	R	S	R	D	A	G	F	D	I	V	Y	V	Y	G	A	H	S	Y	L	P	L	Q	F	L	N	P	Y	Y	N	K	R	T	D	K	Y	G	G	S	L	E	N	R	A	R	F	W	L	E	T	L	E	K	V	K	H	A	V	G	S	D	C	A	I	A	T	R	F	G	V	D	T
Template Known Secondary structure																T		S								T	T									T	T	T					S	T	T	S	S	S																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
						81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110										.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																															.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	.	.	.	.	.	.	.	.	.	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L
Query Conservation		.	.	.	.																															.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																															.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		V	Y	G	P	G	Q	I	E	A	E	V	D	G	Q	K	F	V	E	M	A	D	S	L	V	D	M	W	D	I	T	I	G	D	I	A	E	W	G	E	D	A	G	P	S	R	F	Y	Q	Q	G	H	T	I	P	W	V	K	L	V	K	Q	V	S	K	K	P	V	L	G	.	.	.	.	.	.	V	G	R	Y	T
Template Known Secondary structure		S	S		T	T	S			T	T	T										T	T	T		S							S		S	T	T	G	G	G	T	S			T	T	T			T	T	T	T									T	T		S	S					.	.	.	.	.	.		S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	D	Q	I	N	T	L	V	T	L	P	G	V	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	E	K	M	I	E	I	V	T	K	G	Y	A	D	I	I
Template Known Secondary structure												T	T	S		S	B
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions