Job Description P0A6L4 Confidence 100.00% Date Thu Jan 5 11:03:26 GMT 2012 Rank 14 Aligned Residues 288 % Identity 24% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	L	R	G	V	M	A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M	L	K	G	A	V	T	A	L	I	T	P	F	D	D	N	G	A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A	G	S
Template Known Secondary structure															B		T	T	S		B															T	T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	.	T	L	P	G	V
Query Conservation																																																																												.
Alig confidence																																																		.																										.
Template Conservation																																																		.
Template Sequence		N	S	T	S	E	A	V	E	L	A	K	H	A	E	K	A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	.	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I
Template Known Secondary structure		S	S														T	T		S									S	S																			S	.	S												S	S															T	T
Template Predicted Secondary structure																																																		.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		G	A	L	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	.	R	E	H	P	D	L	V	L	Y	N	G	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	A	Q	K	L	Q	T	E	C	N
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		I	G	V	K	D	A	T	G	K	I	E	R	A	S	E	Q	R	E	K	C	G	K	D	F	V	Q	L	S	G	D	D	C	T	A	L	G	F	N	A	H	G	G	V	G	C	I	S	V	S	S	N	V	A	P	K	L	C	A	Q	L	H	A	A	C	L	C	S	D	Y	K	T	A	L	K	L	N	D	L	L	M
Template Known Secondary structure								S			T												T	T	S					S		T	T	T								T							S	G	G	G	T														T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	I	D	L	L	I	K	T	G	V	F	R	G	L	K	T	V	L	H	Y	M	D	V	V	S	V	P	L	C	R	K	P	F	G	P	V	D	E	K	Y	L	P	E	L	K	A	L	A	Q	Q	L
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		P	L	N	R	A	V	F	I	E	P	S	P	A	G	I	K	Y	A	A	A	K	L	G	.	L	C	G	T	I	V	R	S	P	I	V	P	L	S	D	T	T	K	K	I	I	D	E	A	L	Y	H	A
Template Known Secondary structure							T	T	S	S	S	T	T										T	T	.	S	S						T	T	S																		T
Template Predicted Secondary structure																									.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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