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Job DescriptionP0A6L4
Confidence100.00%DateThu Jan 5 11:03:26 GMT 2012
Rank14Aligned Residues288
% Identity24%Templatec3si9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGC
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Template Sequence  SMLKGAVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGS
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B
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   83......90.........100.........110.........120.........130.........140.........150...... ...160.
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Query Sequence  VSTAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLV. TLPGV
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Template Sequence  NSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS. IPIIIYNIPSRSVIDMAVETMRDLCRDFKNI
Template Known Secondary structure  SSTT
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   84.....90.........100.........110.........120.........130. ........140.........150.........160..
 
   162.......170........ .180.........190.........200.........210.........220.........230.........240
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Query Sequence  GALKQTSGDLYQMEQIR. REHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECN
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Template Sequence  IGVKDATGKIERASEQREKCGKDFVQLSGDDCTALGFNAHGGVGCISVSSNVAPKLCAQLHAACLCSDYKTALKLNDLLM
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   241........250.........260.........270.........280.........290..
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Query Sequence  KVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQL
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Template Sequence  PLNRAVFIEPSPAGIKYAAAKLG. LCGTIVRSPIVPLSDTTKKIIDEALYHA
Template Known Secondary structure  TTSSSTTTT.SS




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   243......250.........260..... ....270.........280.........290...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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