Job Description P0A6L4 Confidence 74.85% Date Thu Jan 5 11:03:26 GMT 2012 Rank 298 Aligned Residues 190 % Identity 14% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																																		.
Template Sequence		R	E	E	L	A	A	I	D	H	S	E	A	G	S	F	V	T	T	G	T	L	E	E	R	A	G	N	P	Q	P	R	Y	A	D	T	K	L	G	S	I	N	S	M	G	L	P	N	L	G	I	N	Y	Y	L	D	Y	V	T	E	L	Q	K	Q	P	.	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E
Template Known Secondary structure										T	S	S		S	B		B			B		S	S		B			S		S							S	S										B	S															S	T	.	T											S	S
Template Predicted Secondary structure																																																																		.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.							.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	.	.	.	.	.	.	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	L	P	G
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																		.										.	.	.
Template Conservation																																																				.										.	.	.
Template Sequence		E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	T	.	K	P	L	G	I	K	L	P	P	.	.	.	Y	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P
Template Known Secondary structure									T	T	T	S	S			S							S				S					G	G	G													T	T	T			.	S									.	.	.
Template Predicted Secondary structure																																																				.										.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		161	.	.	.	.	.	.	.	.																															170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.							.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.							.	.
Query Sequence		V	G	A	L	K	Q	T	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	.	.	L	V	L	Y	N	G	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.							.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.							.	.
Template Conservation
Template Sequence		L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T	G	G	V	T	G	R	D	A	F	E	H	I	L	C	G	A	S	M	V	Q
Template Known Secondary structure			S																T	T						G	G	G							G	G	G													T	T	S		T	T	S						S														T		S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		207	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		G	S	T	Y	N	I	M	.	.	G	W	R	Y	Q	G	I	V	K
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K
Template Known Secondary structure			S								T
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions