Job Description P0A6L4 Confidence 96.05% Date Thu Jan 5 11:03:26 GMT 2012 Rank 79 Aligned Residues 205 % Identity 14% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	.	.	.	.	.	.	.	.	.	G	S	T	G	E	A	F	V	.	.	.	.	.	.	.	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V
Query Conservation																												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.																		.
Template Conservation																																																																					.
Template Sequence		G	D	P	N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	.	P	E	T	P	I	G	L	L	M	Y	A	N
Template Known Secondary structure		T	S	S															T	T		S	S										T	T																T	T																		.	T	T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.
		84	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160
Predicted Secondary structure					.	.																																																																							.
Query SS confidence					.	.																																																																							.
Query Sequence		S	T	A	.	.	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	.	T	L	P	G
Query Conservation					.	.																																																																							.
Alig confidence					.	.																				.	.					.	.	.															.	.												.	.	.	.	.											.
Template Conservation																										.	.					.	.	.															.	.												.	.	.	.	.
Template Sequence		L	V	Y	A	R	G	I	D	D	F	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	.	.	A	D	V	P	.	.	.	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	.	.	G	I	Q	P	I	F	I	A	P	P	T	.	.	.	.	.	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G
Template Known Secondary structure					T	T													T							.	.	T	T	S		.	.	.	G	G	G											T	.	.	T									T	T	.	.	.	.	.			S												S
Template Predicted Secondary structure																										.	.					.	.	.															.	.												.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		V	G	A	L	K	Q	T	S	G	D	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	.	.	.	.	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	A	Q	K	L	Q
Query Conservation																															.	.	.	.
Alig confidence						.																									.	.	.	.																						.	.	.	.	.	.
Template Conservation						.																																																		.	.	.	.	.	.
Template Sequence		Y	T	Y	L	.	L	S	R	A	P	V	H	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L	G	F	G	I	S	E	P	A	Q	V	K	Q	A	I	E	A	G	A	A	G	A	I	S	G	S	A	.	.	.	.	.	.	V	V	K	I	I	E	T	H	L	D	N	P	A	K	Q	L	T	E	L	A
Template Known Secondary structure						.																T	T								S	S			S										T	T		S					S	S		.	.	.	.	.	.								T	T	T
Template Predicted Secondary structure						.																																																		.	.	.	.	.	.
Template SS confidence
		173	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		237	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	N	K	V	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	T	Q	A	M	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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