Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6L4
Confidence100.00%DateThu Jan 5 11:03:26 GMT 2012
Rank2Aligned Residues293
% Identity100%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV
Query Conservation     

  
  


  
  

       
  
   

 

 
 




   

 


  
     
       

 

   
Alig confidence 















































































Template Conservation     

  
  


  
  

   
   
  
   

 

   




   

  

  
             

 

   
Template Sequence  NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV
Template Known Secondary structure 


S



B
TTS
B
TT
SSSGGGTGGGS
TTTS


S
Template Predicted Secondary structure 





































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA
Query Conservation   
   
  
  
   


 


  
 
       
      

      

 


 
  

          
     
 
Alig confidence 















































































Template Conservation 
  
 
  
  
   


 
 
  
 
   
   
      
       

 


 
  

  
       
   
 
 
Template Sequence  STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA
Template Known Secondary structure  ST
S


SS


TTT







TSTT
Template Predicted Secondary structure 































Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  LKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVI
Query Conservation 

 
  
      
        
  
 
      
  
  
      
  
        
   

   
  
   
    
Alig confidence 















































































Template Conservation 

 
  
               
  
 
      
  
  
 

   
  
        
   

   
  
   
    
Template Sequence  LKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVI
Template Known Secondary structure 




TT



GGGT

TTTT
Template Predicted Secondary structure 















Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290......
Predicted Secondary structure 





















Query SS confidence 




















































Query Sequence  DLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER
Query Conservation              
  
   
       
 
   
       
   
  
    
Alig confidence 




















































Template Conservation              
  
   
       
 
   
       
   
  
  
 
Template Sequence  DLLIKTGWFRGLKTVLHYMDVVSVPLCRKPFGPVDEKYLPELKALAQQLMQER
Template Known Secondary structure 
TTS
S




TTS



GGG
Template Predicted Secondary structure 





















Template SS confidence 




















































   244.....250.........260.........270.........280.........290......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions