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Job DescriptionP0A6L4
Confidence90.73%DateThu Jan 5 11:03:26 GMT 2012
Rank168Aligned Residues199
% Identity17%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  NLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCV
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Template Sequence  NTKPLIPVIVID. . . . . . . DLVHAIPXAKALVAGGVHLLEV. . . . . . . . TLRTEAGLAAISAIKKAVP. . . EAIVGAGTV
Template Known Secondary structure  TS
S

S.......
GGGTT

........TTSTT
T...TS

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   10.........20. ........30.........40... ......50.........60.. .......70.
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  STAESQQLAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGA
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Template Sequence  CTADDFQKAIDA. . . GAQFIVSPG. . . . . . LTPELIEKAKQVKLDGQWQGVFL. . . PGV. . . . ATASEVXIAAQAG. ITQ
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S...T
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   72.......80... ......90.. .......100.........110..... ... .120.........130. ...
 
   164. ....170.........180... ...... 190.........200.........210.........220.........230......
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Query Sequence  LK. . . . QTSGDLYQMEQIRREHPD. . LVLYNG. YDEIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQ
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Template Sequence  LKCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNYKEYLGLPNVICAGGSWLTESKLLIE. . . . . . . GDWNEVTRRA
Template Known Secondary structure  TTTTTTTTT
TT
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TTTSTTB

SGGG
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   135....140.........150.........160.........170.........180.........190....... ..200.......
 
   237..240....
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Query Sequence  TECNKVID
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Template Sequence  SEIVKLSD
Template Known Secondary structure  S

GGG
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   208.210.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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