Job Description P0A6L4 Confidence 81.75% Date Thu Jan 5 11:03:26 GMT 2012 Rank 254 Aligned Residues 124 % Identity 17% Template c3ijdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: uncharacterized protein cthe_2304 from clostridium2 thermocellum binds two copies of 5-methyl-5,6,7,8-3 tetrahydrofolic acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T	A	E	S	Q	Q	.	.	.	.	.	L	A	A	S	A	K	R
Query Conservation																																																																						.	.	.	.	.
Alig confidence																								.	.	.	.											.	.	.												.	.	.																.	.	.	.	.
Template Conservation																								.	.	.	.											.	.	.												.	.	.
Template Sequence		T	P	D	E	F	R	R	L	T	R	P	V	S	G	Q	D	A	F	S	V	F	V	.	.	.	.	G	A	A	V	L	L	K	L	S	D	.	.	.	A	Y	K	I	R	Q	D	V	N	P	D	.	.	.	L	L	L	G	G	V	A	I	P	E	R	H	M	K	N	T	D	E	H	L	R	I	I	D	K	I	N
Template Known Secondary structure											S			T	T									.	.	.	.						S					.	.	.										T	T	.	.	.	S															S
Template Predicted Secondary structure																								.	.	.	.											.	.	.												.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	.	.	.	.	.	G	L	P	M	V	V	Y	N	I	P	.	.	.	.	.	.	.	.	.	.	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	T	L	P	G
Query Conservation																																			.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																		.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		K	G	C	K	Y	F	I	T	Q	A	V	Y	.	.	.	.	N	V	E	A	A	K	D	F	L	S	D	Y	Y	Y	Y	S	K	N	N	N	L	K	M	V	P	I	I	F	T	L	T	P	C	G	S	T	K	T	L	E	F	M	K	W	L	G	I	S	I	P	R	W	L	E	N	D	L	M	N	C	E	D
Template Known Secondary structure		T	T							S				.	.	.	.																			T	T															S											T													T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions