Job Description P0A6L4 Confidence 83.21% Date Thu Jan 5 11:03:26 GMT 2012 Rank 244 Aligned Residues 203 % Identity 13% Template c3h5oB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator gntr; PDBTitle: the crystal structure of transcription regulator gntr from2 chromobacterium violaceum Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		D	A	G	Q	E	L	Q	L	L	R	A	Y	L	Q	H	R	P	D	G	V	L	I	T	G	L	S	H	A	.	.	E	P	F	E	R	I	L	S	Q	H	A	L	P	V	V	Y	X	X	D	L	A	D	D	G	R	C	C	V	G	F	S	Q	E	D	A	G	A	A	I	T	R	H	L	L	S	R	G	K	R	R
Template Known Secondary structure															T	T			S						S	S				.	.	T	T								T	T								S			S	S	S																						T	T			S
Template Predicted Secondary structure																														.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.
Predicted Secondary structure																																																								.																		.	.
Query SS confidence																																																								.																		.	.
Query Sequence		V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	.	T	L	P	G	V	G	A	L	K	Q	T	S	G	D	L	Y	Q	.	.	M	E	Q	I	R	R
Query Conservation																																																								.																		.	.
Alig confidence																																																								.																		.	.
Template Conservation
Template Sequence		I	G	F	L	G	A	Q	L	D	E	R	V	X	K	R	L	D	G	Y	R	A	A	L	D	A	A	D	C	R	D	A	G	L	E	W	L	D	P	Q	P	S	S	X	Q	X	G	A	D	X	L	D	R	A	L	A	E	R	P	D	C	D	A	L	F	C	C	N	D	D	L	A	I	G	A	L	A	R	S	Q	Q
Template Known Secondary structure								S																				T				G	G	G						S																			T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		E	H	.	.	.	.	P	D	L	V	L	Y	N	G	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.							.
Template Conservation														.
Template Sequence		L	G	I	A	V	P	E	R	L	A	I	A	.	G	F	N	D	L	Q	P	A	A	W	C	T	P	P	L	T	T	V	A	T	P	R	R	D	I	G	V	H	A	A	K	A	L	L	Q	L	I	D	G	E
Template Known Secondary structure		T	T			T	T	T	T					.		S	B							T	S	S	S			B																						T	T
Template Predicted Secondary structure														.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions