 |
Job Description | P0A6L4 | Confidence | 96.40% | Date | Thu Jan 5 11:03:26 GMT 2012 |
Rank | 66 | Aligned Residues | 96 |
% Identity | 18% | Template | c3ez4B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; |
PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei
|
Resolution | 2.10 Å |
|
 |
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | D | Q | Q | Q | A | L | D | K | A | S | L | R | R | L | V | Q | F | N | I | Q | Q | G | I | D | G | L | Y | V | G | G | S | T | G | E | A | F | V | Q | S | L | S | E | R | E | Q | V | L | E | I | V | A | E | E | A | K | G | K | I | K | L | I | A | H | V | G | C | V | S | T | A | E | S | Q | Q | L | A | A | S |
Query Conservation |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   | . | . |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|
| . |
|   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
P | F | G | T | Y | G | . |
. |
T | P | A | D | A | F | A | S | A | V | K | L | M | R | A | G | A | Q | M | V | K | L | E | G | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | W | L | A | E | T | V | R | F | L | V | E | R | A | V | P | V | C | A | H | V | G | . |
L | G | A | A | Q | L | L | R | D | A | R | A |
Template Known Secondary structure |   |
| T | T | S |
| S | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | |
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | K | R | Y | G | F | D | A | V | S | A | V | T | P | F | Y | Y | P | F | S | F | E | E | H | C | D | H | Y | R | A | I | I | D | S | A | D | G | L | P | M | V |
Query Conservation |   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |
|   |
|
|   | . | . | . | . | . | . |
|
|   |   |   |
| . | . | . |   |   |
|
|   |   |   |   | . |
|
|
|
|
Template Sequence |   |
V | E | E | A | G | A | Q | L | I | V | L | E | A | . |
. |
. |
. |
. |
. |
V | P | T | L | V | A | . |
. |
. |
A | E | V | T | R | E | L | S | . |
I | P | T | I |
Template Known Secondary structure |   |
 |  |  |  | T |
| S |  |  |  |  |  | S | . | . | . | . | . | . |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |
| S | . | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  | . | . | . |  |  |  |  |  |  |
|
| . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
168 | . | 170 | . | . | . | . | . | . | . | . | . | 180 | |
|
|
|
|
|
. | . | . | . | . | . | |
|
|
. | . | . | 190 | . | . | . | . | |
. | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|