Job Description P0A6L4 Confidence 100.00% Date Thu Jan 5 11:03:26 GMT 2012 Rank 32 Aligned Residues 289 % Identity 22% Template c3dz1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution Resolution 1.87 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	T	N	L	R	G	V	M	A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V
Query Conservation
Alig confidence																																																																								.
Template Conservation																																																																								.
Template Sequence		L	T	P	E	A	A	G	T	F	A	I	A	P	T	P	F	H	D	D	G	K	I	D	D	V	S	I	D	R	L	T	D	F	Y	A	E	V	G	C	E	G	V	T	V	L	G	I	L	G	E	A	P	K	L	D	A	A	E	A	E	A	V	A	T	R	F	I	K	R	A	.	K	S	X	Q	V	I	V	G	V
Template Known Secondary structure				T	T												B		T	T	S		B															T	T		S					S	T	G	G	G	T	G	G	G	S																	.	T	T	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																			.																												.
Query SS confidence																																																			.																												.
Query Sequence		G	C	V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	.	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	.	T	L
Query Conservation																																																			.																												.
Alig confidence																																		.																	.																												.
Template Conservation																																		.
Template Sequence		S	A	P	G	F	A	A	X	R	R	L	A	R	L	S	X	D	A	G	A	A	G	V	X	I	A	P	P	P	S	L	R	.	T	D	E	Q	I	T	T	Y	F	R	Q	A	T	E	A	I	G	D	D	V	P	W	V	L	Q	D	Y	P	L	T	L	S	V	V	X	T	P	K	V	I	R	Q	I	V	X	D	S
Template Known Secondary structure				S	S															T		S								T	T			.	S																	T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure														.											.	.	.	.	.
Query SS confidence														.											.	.	.	.	.
Query Sequence		P	G	V	G	A	L	K	Q	T	S	G	D	.	L	Y	Q	M	E	Q	I	R	R	E	.	.	.	.	.	H	P	D	L	V	L	Y	N	G	Y	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	A
Query Conservation														.											.	.	.	.	.
Alig confidence														.											.	.	.	.	.																							.
Template Conservation																																																				.
Template Sequence		A	S	C	V	X	L	K	H	E	D	W	P	G	L	E	K	I	T	T	L	R	G	F	Q	K	D	G	S	L	R	P	L	S	I	L	C	G	N	G	G	L	F	L	D	F	E	X	E	R	G	.	A	D	G	A	X	T	G	Y	C	F	P	D	X	L	V	D	V	V	K	L	S	K	A	G	Q	R	D	L	A
Template Known Secondary structure		S	S									S	S															T	S	S									G	G	G	T	T								T	.									S														T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Q	K	L	Q	T	E	C	N	K	V	I	D	L	L	I	K	T	G	.	V	F	R	G	L	K	T	V	L	H	Y	M	D	V	V	S	V	P	L	C	R	K	P	F	G	P	V	D	E	K	Y	L	P	E	L	K	A	L	A	Q	Q	L
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		H	N	L	F	D	A	H	L	P	L	I	R	Y	E	H	Q	Q	G	V	G	L	S	V	R	K	Y	V	L	K	K	R	G	L	L	S	S	S	A	Q	R	K	P	G	A	S	L	T	D	T	A	R	E	E	V	D	Y	L	L	S	R	L
Template Known Secondary structure																	S	T	T													T	T	S		S						S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions