Job Description P0A6L4 Confidence 89.44% Date Thu Jan 5 11:03:26 GMT 2012 Rank 189 Aligned Residues 122 % Identity 17% Template c3c52B_ PDB info PDB header:lyase Chain: B: PDB Molecule:fructose-bisphosphate aldolase; PDBTitle: class ii fructose-1,6-bisphosphate aldolase from2 helicobacter pylori in complex with3 phosphoglycolohydroxamic acid, a competitive inhibitor Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																			.														.	.	.	.	.
Query SS confidence																																																			.														.	.	.	.	.
Query Sequence		L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	.	K	G	K	I	K	L	I	A	H	V	G	C	V	.	.	.	.	.	S	T	A	E	S	Q	Q	L	A	A	S	A
Query Conservation																																																			.														.	.	.	.	.
Alig confidence																													.	.	.	.	.																		.														.	.	.	.	.											.	.
Template Conservation																													.	.	.	.	.																																															.	.
Template Sequence		L	D	H	G	T	T	F	E	S	C	E	K	A	V	K	A	G	F	T	S	V	M	I	D	A	S	H	.	.	.	.	.	H	A	F	E	E	N	L	E	L	T	S	K	V	V	K	M	A	H	N	A	G	V	S	V	E	A	E	L	G	R	L	M	G	I	L	V	N	P	K	E	A	E	Q	F	V	K	.	.
Template Known Secondary structure							S											T		S							T	T	.	.	.	.	.	S																			T	T								S																		.	.
Template Predicted Secondary structure																													.	.	.	.	.																																															.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	Y	G	F	D	A	V	S	A	V	T	.	.	.	.	.	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.																								.							.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																								.							.	.	.	.	.
Template Sequence		.	E	S	Q	V	D	Y	L	A	P	A	I	G	T	S	H	G	A	F	K	F	K	G	E	P	K	L	D	F	E	R	L	Q	E	V	K	R	L	T	N	.	I	P	L	V	L	H	.	.	.	.	.	G	A	S	A	I	P	D	N	V	R	K	S	Y	L	D	A	G	G	D	L	K	G	S	K	G	V	P	F
Template Known Secondary structure		.					S						S	S			S	S	S	B			S	S	S																	.	S						.	.	.	.	.	S															T	T				T	T		B
Template Predicted Secondary structure		.																																								.							.	.	.	.	.
Template SS confidence
			166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210						.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	I	N	T	L	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	L	Q	E	S	V	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions