Job Description P0A6L4 Confidence 94.93% Date Thu Jan 5 11:03:26 GMT 2012 Rank 105 Aligned Residues 201 % Identity 17% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	E	Q	V	L	E	I	V	A	E	E	A	.	K	G	K	I	K	L	I	A	H	V	G	C
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	L	L	M	T	Y	Y	N	P
Template Known Secondary structure		T	S	S															T	T		S									S			T	T	S														T	T																		T	T	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		V	S	T	A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	L	T	L	D	Q	I	N	T	L	V	.	T	L	P	G	V
Query Conservation																																																																												.
Alig confidence																									.	.					.	.	.															.	.												.	.	.	.	.											.
Template Conservation																									.	.					.	.	.															.	.												.	.	.	.	.
Template Sequence		I	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V	.	.	P	D	L	P	.	.	.	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	.	.	V	L	S	F	V	P	L	G	A	P	T	.	.	.	.	.	S	T	R	K	R	I	K	L	I	C	E	A	A	D	E	M
Template Known Secondary structure																	T	T							.	.	T	T			.	.	.														T	.	.	T									T	T	.	.	.	.	.														S	S
Template Predicted Secondary structure																									.	.					.	.	.															.	.												.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		162	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure											.	.	.																					.	.
Query SS confidence											.	.	.																					.	.
Query Sequence		G	A	L	K	Q	T	S	G	D	.	.	.	L	Y	Q	M	E	Q	I	R	R	E	H	P	D	L	V	L	Y	N	G	Y	.	.	D	E	I	F	A	S	G	L	L	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	D	I	Q	T	A	Q	K	L	Q
Query Conservation											.	.	.																					.	.
Alig confidence											.	.	.																					.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	F	V	S	V	T	G	Y	E	R	I	K	K	K	V	E	E	Y	R	E	L	C	D	K	P	V	V	V	G	F	G	V	S	K	K	E	H	A	R	E	I	G	S	F	A	D	G	V	V	V	G	S	A	.	.	.	.	.	.	.	.	.	L	V	K	L	A	G	Q	K	K	I	E	D	L	G	N	L	V
Template Known Secondary structure						S	S																			S						S	S			S									T	T	S	S								.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.										.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		237	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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