Job Description P0A6L4 Confidence 96.39% Date Thu Jan 5 11:03:26 GMT 2012 Rank 67 Aligned Residues 229 % Identity 16% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		A	A	L	L	T	P	F	D	Q	Q	Q	A	L	D	K	A	S	L	R	R	L	V	Q	F	N	I	Q	Q	G	I	D	G	L	Y	V	G	G	S	T	G	E	A	F	V	Q	S	L	S	E	R	.	.	.	.	E	Q	V	L	E	I	V	A	E	E	A	K	G	K	I	K	L	I	A	H	V	G	C	V	S	T
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.																								.
Template Conservation																																																																															.
Template Sequence		P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	.	P	V
Template Known Secondary structure									S	S	S	S																		T		S						T	T				B	T	T	B																					S	S							B			S	.	S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.								.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		A	E	S	Q	Q	L	A	A	S	A	K	R	Y	G	F	D	A	V	S	A	V	T	P	F	Y	Y	P	F	S	F	E	E	H	C	D	H	Y	R	A	I	I	D	S	A	D	G	L	P	M	V	V	Y	N	I	P	A	L	S	G	V	K	.	.	.	.	.	.	.	L	T	L	D	Q	I	N	T	L	V	T	L
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.								.	.								.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.								.	.
Template Sequence		N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	.	.	.	.	.	G	L	A	I	H	A	H	.	.	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M
Template Known Secondary structure														T	T																											.	.	.	.	.	T							.	.		T	T	T					S		T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.								.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		159	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure												.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.
Query Sequence		P	G	V	G	A	L	K	Q	T	S	.	.	.	.	.	.	G	D	L	Y	Q	M	E	Q	I	R	R	.	.	.	.	.	.	.	.	E	H	P	D	L	V	L	Y	N	G	.	.	Y	D	E	I	F	A	S	G	L	L	.	A	G	A	D	G	G	I	G	S	T	Y	N	I	M	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.												.	.	.	.	.	.	.	.											.	.											.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	V	D	Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A
Template Known Secondary structure			T		S									S	S																	S		B	T	T	B									S	S			G	G	G										S	S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
			214	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.															.
Query SS confidence		.															.
Query Sequence		.	G	W	R	Y	Q	G	I	V	K	A	L	K	E	G	.	D	I	Q	T	A	Q	K	L	Q	T	E	C	N	K	V	I	D	L	L
Query Conservation		.															.
Alig confidence		.															.
Template Conservation
Template Sequence		G	A	K	A	L	R	D	A	I	D	A	A	I	E	G	V	D	L	D	E	K	A	K	S	S	P	E	L	K	K	S	L	R	E	V
Template Known Secondary structure																T								T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions