 |
Job Description | P0A6L4 | Confidence | 50.89% | Date | Thu Jan 5 11:03:26 GMT 2012 |
Rank | 400 | Aligned Residues | 134 |
% Identity | 15% | Template | c2chrA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:chloromuconate cycloisomerase; |
PDBTitle: a re-evaluation of the crystal structure of chloromuconate2 cycloisomerase
|
Resolution | 3.00 Å |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
A | A | L | L | T | P | F | D | Q | Q | Q | A | L | D | K | A | S | L | R | R | L | V | Q | F | N | I | Q | Q | G | I | D | G | L | Y | V | . |
G | G | S | T | G | E | A | F | V | Q | S | L | S | E | R | E | Q | V | L | E | I | V | A | E | E | A | K | G | K | I | K | L | I | A | H | V | G | . |
C | V | S | T | A | E |
Query Conservation |   |
  |
|   |   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
| . |   |
|
|
|
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|   | . |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|   |   |   | . | . | . | . | . | . |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
S | A | I | P | I | A | W | T | L | A | S | G | D | T | K | R | D | L | D | S | A | V | E | M | I | E | R | R | R | H | N | R | F | K | V | K | L | G | F | R | S | . |
. |
. |
. |
. |
. |
P | Q | D | D | L | I | H | M | E | A | L | S | N | S | L | G | S | K | A | Y | L | R | V | D | V | N | Q | A | W | D | E | Q | V |
Template Known Secondary structure |   |
S |  |  |  | B |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |
| S | S | S |
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |  |  |  |  |  |
| T | T |
|
|
| T |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . |
  |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | Q | L | A | A | S | A | K | R | Y | G | F | D | A | V | S | A | V | T | P | F | Y | Y | . |
P | F | S | F | E | E | H | C | D | H | Y | R | A | I | I | D | S | A | D | G | L | P | M | V | V | Y | N | I | P | A | L | S | G | V | K | L | T | L | D | Q | I | N | T | L | V | T | L | P | G | V | G | A | L |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|   |
|   | . |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   | . |
|
|
|
|   |
|
|   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
Template Sequence |   |
A | S | V | Y | I | P | E | L | E | A | L | G | . |
. |
. |
. |
. |
. |
. |
. |
V | E | L | I | E | Q | P | V | G | R | E | N | T | Q | A | L | R | R | L | S | D | N | N | R | . |
V | A | I | M | A | D | E | S | L | . |
. |
. |
. |
. |
. |
S | T | L | A | S | A | F | D | L | A | R | D | R | S | V | D | V | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
| S |
| S | S |
|  |  |  |  |  |  |  |  |  |  |
| S | . | S |  |  |  |  | S | S | S |
| . | . | . | . | . | . |
| S |  |  |  |  |  |  |  |  | T | T | T |
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
204 | . | . | . | . | . | 210 | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
240 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|