Job Description Q46787 Confidence 24.04% Date Thu Jan 5 12:34:09 GMT 2012 Rank 143 Aligned Residues 102 % Identity 7% Template c3spaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase, mitochondrial; PDBTitle: crystal structure of human mitochondrial rna polymerase Resolution 2.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		P	D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	A	F	E	.	.	.	.	N	H	E	Y	L	K	D	F	A	S	V	C	Q	P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	Y	F	P	Y	D	D	Y	S	V	I
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.
Template Conservation
Template Sequence		S	G	Q	Q	Q	R	L	L	A	F	F	K	C	C	L	L	T	D	Q	L	P	L	A	H	H	L	L	V	V	H	H	G	Q	R	Q	K	R	K	L	L	T	L	D	M	Y	N	A	V	M	L	G	W	A	R	Q	G	A	F	K	E	L	V	Y	V	L	F	M	V	K	D	A	G	L	T	P	D	L	L	S	Y
Template Known Secondary structure																			T															S					T	T																	T															T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	.	C	F	Y	H	I	I	N	N
Query Conservation																				.
Alig confidence																				.
Template Conservation
Template Sequence		A	A	A	L	Q	C	M	G	R	Q	D	Q	D	A	G	T	I	E	R	C	L	E	Q	M	S	Q	E
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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