 |
Job Description | Q46787 | Confidence | 51.63% | Date | Thu Jan 5 12:34:09 GMT 2012 |
Rank | 130 | Aligned Residues | 90 |
% Identity | 11% | Template | c3re2A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:predicted protein; |
PDBTitle: crystal structure of menin reveals the binding site for mixed lineage2 leukemia (mll) protein
|
Resolution | 1.95 Å |
|
 |
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | H | G | L | T | P | D | I | L | D | R | I | Y | A | Y | A | F | D | Y | H | E | K | G | N | I | T | D | A | E | I | Y | Y | K | F | L | C | I | Y | A | F | E | N | H | E | Y | L | K | D | F | A | S | V | C | Q | P | K | K | K | Y | Q | Q | A | Y | D | L | Y | K | L | S | Y | N | Y | F | P | Y | D | D | Y | S |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |
| . | . | . | . |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|   |   | . | . | . |
|   |   |   |
|   |   |   |
|
|
|
Template Sequence |   |
Q | L | S | Q | L | Q | Q | E | L | L | W | L | L | Y | D | M | G | . |
. |
. |
. |
H | I | K | T | Y | P | M | A | I | A | N | L | G | D | L | E | E | I | S | P | T | P | G | R | P | P | . |
. |
. |
. |
. |
. |
. |
. |
A | E | E | L | F | K | E | A | I | T | V | . |
. |
. |
A | K | R | E | Y | S | D | H | H | I | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | S |
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | S | T | T |
|
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | |
|
|
|
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 280 | . | . | . | |
|
|
. | . | . | . | . | . | 290 | . | . | . | . |
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | Y | R | M | G | Q | C | Q | I | G | A | K | N | I | D | N | A | M | Q | C | F | Y | H | I |
Query Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   |
|
|   |   |   |
|
|   |
|
Template Sequence |   |
P | Y | T | Y | L | G | G | Y | Y | Y | R | K | K | K | Y | Y | E | A | I | A | S | W | V | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|