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Job DescriptionQ46787
Confidence99.64%DateThu Jan 5 12:34:09 GMT 2012
Rank41Aligned Residues146
% Identity6%Templatec3q75A_
PDB info PDB header:transferaseChain: A: PDB Molecule:farnesyltransferase alpha subunit; PDBTitle: cryptococcus neoformans protein farnesyltransferase in complex with2 fpt-ii and tkcvvm peptide
Resolution2.14 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50..... ....60.........70.........80.
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Query Sequence  TETIEIFNNSDEWANQLKHALSKGENLALLHGLTPDILDRIYAYAFDYHEKGN. ITDAEIYYKFLCIYAFENHEYLKDFA
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Template Sequence  KDAMDYFRAIAAKEEKSERALEL. . . TEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRL
Template Known Secondary structure  T

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   40.........50.........60.. .......70.........80.........90.........100.........110......
 
   82....... 90.........100.........110.........120.... .....130.........140.........150.
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Query Sequence  SVCQPKKK. . YQQAYDLYKLSYNYFPYDDYSVIYRMGQCQIGAKN. . . . . . . . IDNAMQCFYHIINNCEDDSVKSKAQAY
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Template Sequence  LLLDRISPQDPVSEIEYIHGSLLPDP. KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWY
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   117..120.........130.........140.. .......150.........160.........170.........180.........190.....
 
   152
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Query Sequence  I
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Template Sequence  L
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   196
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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