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Job DescriptionQ46787
Confidence99.53%DateThu Jan 5 12:34:09 GMT 2012
Rank63Aligned Residues157
% Identity10%Templatec3mv3B_
PDB info PDB header:protein transportChain: B: PDB Molecule:coatomer subunit epsilon; PDBTitle: crystal structure of a-cop in complex with e-cop
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  STETIEIFNNSDEWANQLKHALSKGENLALLHGL. . TPDILDRIYAYAFDYHEKGNITDAEIYYKFLCIYAFEN. . . . . .
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Template Sequence  SPYELYLLATAQAILGDLDKSLET. . . CVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNE
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T
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TT
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   85....90.........100........ .110.........120.........130.........140.........150.........160.
 
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Query Sequence  . . HEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIYRMGQCQIGAKNIDNAMQCFYHIINNCED. . . . . . . DSV
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Template Sequence  XILNLAESYIKFATNKETATSNFYYYEELSQTFP. . TWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY
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TTTTTS
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   162.......170.........180.........190..... ....200.........210.........220.........230.........
 
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Query Sequence  KSKAQAYIELLNDNSEDNG
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Template Sequence  KPTFLANQITLALXQGLDT
Template Known Secondary structure  TT
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   240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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