Job Description Q46787 Confidence 48.83% Date Thu Jan 5 12:34:09 GMT 2012 Rank 131 Aligned Residues 96 % Identity 9% Template c3lpzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:get4 (yor164c homolog); PDBTitle: crystal structure of c. therm. get4 Resolution 1.98 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.								.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		P	D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	.	.	.	.	.	A	F	E	N	H	E	Y	L	K	D	F	A	S	V	C	Q	.	.	.	.	.	.	.	P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	Y	F
Query Conservation																																			.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	V	D	I	L	A	S	V	S	Q	T	L	L	R	S	G	Q	G	G	S	G	G	D	L	A	V	L	L	V	D	T	F	R	Q	A	G	Q	R	V	D	G	A	S	R	G	K	L	L	G	C	L	R	L	F	Q	P	G	E	P	V	R	K	R	F	V	K	E	M	I	D	W	S	K	K	F	G	D	Y
Template Known Secondary structure																		T	T																				T																T	T	S		T	T																			S	S
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	D	D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	G	D	P	E	L	H	H	V	V	G	T	L	Y	V	E	E	G	E	F	E	A	A	E	K	H	L
Template Known Secondary structure		T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions