Job Description Q46787 Confidence 21.47% Date Thu Jan 5 12:34:09 GMT 2012 Rank 147 Aligned Residues 106 % Identity 15% Template c3eiqC_ PDB info PDB header:hydrolase/antitumor protein Chain: C: PDB Molecule:programmed cell death protein 4; PDBTitle: crystal structure of pdcd4-eif4a Resolution 3.50 Å

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		34	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																												.	.
Query SS confidence												.	.	.	.																																												.	.
Query Sequence		G	L	T	P	D	I	L	D	R	I	.	.	.	.	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	A	F	E	N	H	E	Y	L	K	D	F	A	S	V	C	Q	P	.	.	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	Y	F	P	Y	D
Query Conservation												.	.	.	.																																												.	.
Alig confidence												.	.	.	.																																												.	.
Template Conservation
Template Sequence		G	G	G	Q	Q	P	V	N	H	L	V	K	E	I	D	M	L	L	K	E	Y	L	L	S	G	D	I	S	E	A	E	H	C	L	K	E	L	E	V	P	H	F	H	H	E	L	V	Y	E	A	I	V	M	V	L	E	S	T	G	E	S	A	F	K	M	I	L	D	L	L	K	S	L	W	K	S	S	T	I	T
Template Known Secondary structure				S	S	S																																			T	T																		S	S																T	T		S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	.	.	.	.	A	M	Q	C	F	Y	H	I	I	N	N	C
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.
Template Conservation
Template Sequence		I	D	Q	M	K	R	G	Y	E	R	I	Y	N	E	I	P	D	I	N	L	D	V	P	H	S	Y	S	V	L	E	R	F	V	E	E	C
Template Known Secondary structure																								T	T
Template Predicted Secondary structure
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions