Job Description Q46787 Confidence 99.61% Date Thu Jan 5 12:34:09 GMT 2012 Rank 50 Aligned Residues 135 % Identity 10% Template c3cvpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:peroxisome targeting signal 1 receptor pex5; PDBTitle: structure of peroxisomal targeting signal 1 (pts1) binding2 domain of trypanosoma brucei peroxin 5 (tbpex5)complexed3 to pts1 peptide (10-skl) Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	F	N	N	S	D	E	W	A	N	Q	L	K	H	A	L	S	K	G	E	N	L	A	L	L	H	G	L	T	P	D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	A	F	E	N	H	E	Y	L	K	D	F	A	S	V	C	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	L	H	A	S	L	G	V	L	Y	N	L	S	N	N	Y	D	S	A	A	A	N	L	R	R	A	V	E	L	R	P	D	D	A	Q	L	W	N	K	L	G	A	T	L	A	N	G	N	R	P	Q	E	A	L	D	A	Y	N	R	A	L	D	I	N	P	G	Y	V	R	V	M	Y	N	M	A	V	S	Y	S
Template Known Secondary structure															T	T																	T	T															T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	Y	F	P	Y	D	D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	C	F	Y	H	I	I	N	N	C	E	D	D
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		N	M	S	Q	Y	D	L	A	A	K	Q	L	V	R	A	I	Y	M	Q	V	T	R	.	.	S	M	W	D	F	F	R	M	L	L	N	V	M	N	R	P	D	L	V	E	L	T	Y	A	Q	N	V	E	P	F	A	K	E
Template Known Secondary structure			T	T																				.	.													T	T								G	G	G	T		S
Template Predicted Secondary structure																								.	.
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.			.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions