Return to main results Retrieve Phyre Job Id

Job DescriptionQ46787
Confidence99.92%DateThu Jan 5 12:34:09 GMT 2012
Rank2Aligned Residues128
% Identity21%Templatec2xcbA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:regulatory protein pcrh; PDBTitle: crystal structure of pcrh in complex with the chaperone2 binding region of popd
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
Predicted Secondary structure 










Query SS confidence 















































































Query Sequence  LHGLTPDILDRIYAYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSV
Query Conservation     
 
     

  
      
   

   
       
        

        
  

     
           
Alig confidence 









































































.




Template Conservation 
  
 
         
      
    
           
        

           
      
    
.     
Template Sequence  LRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI. NEPRF
Template Known Secondary structure 
TT

TT

TT
TT

T.T
T
Template Predicted Secondary structure 

























.




Template SS confidence 















































































   28.30.........40.........50.........60.........70.........80.........90.........100. .....
 
   112.......120.........130.........140. ........150.........160
Predicted Secondary structure 


....
Query SS confidence 





























. . . .


















Query Sequence  IYRMGQCQIGAKNIDNAMQCFYHIINNCED. . . . DSVKSKAQAYIELLNDNSE
Query Conservation     

  
   
    
   
   
    
....      
   
  
     
Alig confidence 





























....


















Template Conservation      
      
    
      
                
   
  
   

Template Sequence  PFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKD
Template Known Secondary structure  TT
T
GGG
Template Predicted Secondary structure 











Template SS confidence 




















































   107..110.........120.........130.........140.........150.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions