Job Description Q46787 Confidence 99.35% Date Thu Jan 5 12:34:09 GMT 2012 Rank 75 Aligned Residues 116 % Identity 9% Template c2uy1A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:cleavage stimulation factor 77; PDBTitle: crystal structure of cstf-77 Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	G	E	N	L	A	L	L	H	G	L	T	P	D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	A	F	E	N	H	E	Y	L	K	D	F	A	S	V	C	Q	P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	Y	G	D	L	K	R	K	Y	S	F	S	K	E	L	D	L	L	R	I	N	H	L	N	Y	V	L	K	K	R	G	L	E	L	F	R	K	L	F	I	E	L	G	N	E	G	V	G	P	H	V	F	I	Y	C	A	F	I	E	Y	Y	A	T	G	S	R	A	T	P	Y	N	I	F	S	S	G	L	L	K
Template Known Secondary structure											T																																		T	T	S																					S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	Y	D	D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	C	F	Y	H	I	I	N	N	C	E
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		H	P	.	D	S	T	L	L	K	E	E	F	F	L	F	L	L	R	I	G	D	E	E	N	A	R	A	L	F	K	R	L	E	K	T	S	R
Template Known Secondary structure			T	.	T																T												S			B
Template Predicted Secondary structure				.
Template SS confidence
		350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions