Job Description Q46787 Confidence 99.13% Date Thu Jan 5 12:34:09 GMT 2012 Rank 88 Aligned Residues 154 % Identity 11% Template c2ifuA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:gamma-snap; PDBTitle: crystal structure of a gamma-snap from danio rerio Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		T	E	T	I	E	I	F	N	N	S	D	E	W	A	N	Q	L	K	H	A	L	S	K	G	E	N	L	A	L	L	H	G	L	T	P	D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	Y	.	.	.	.	.	.	A	F	E	N	H	E	Y
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence																									.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		G	X	X	L	K	D	L	Q	R	X	P	E	A	V	Q	Y	I	E	K	A	S	V	X	.	.	.	.	.	Y	V	E	N	G	T	P	D	T	A	A	X	A	L	D	R	A	G	K	L	X	E	P	L	D	L	S	K	A	V	H	L	Y	Q	Q	A	A	A	V	F	E	N	E	E	R	L	R	Q	A	A	E	L
Template Known Secondary structure								T	T		G	G	G	G											.	.	.	.	.			T	T	T																	T	T	T																			T	T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																							.	.
Query SS confidence																												.	.	.	.	.																																							.	.
Query Sequence		L	K	D	F	A	S	V	C	Q	P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y	N	.	.	.	.	.	Y	F	P	Y	D	D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	C	F	Y	H	I	I	N	N	C	E	.	.	D	D	S	V	K	S	K	A	Q
Query Conservation																												.	.	.	.	.																																							.	.
Alig confidence																												.	.	.	.	.																																							.	.
Template Conservation
Template Sequence		I	G	K	A	S	R	L	L	V	R	Q	Q	K	F	D	E	A	A	A	S	L	Q	K	E	K	S	X	Y	K	E	X	E	N	Y	P	T	C	Y	K	K	C	I	A	Q	V	L	V	Q	L	H	R	A	D	Y	V	A	A	Q	K	C	V	R	E	S	Y	S	I	P	G	F	S	G	S	E	D	C	A	A	L	E
Template Known Secondary structure												T	T																			T	T																			T	T													T	T	S	T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	I	E	L	L	N	D	N	S	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	Q	A	Y	D	E	Q	D	E	E
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions