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Job DescriptionQ46787
Confidence99.58%DateThu Jan 5 12:34:09 GMT 2012
Rank60Aligned Residues116
% Identity11%Templatec2ho1B_
PDB info PDB header:protein bindingChain: B: PDB Molecule:type 4 fimbrial biogenesis protein pilf; PDBTitle: functional characterization of pseudomonas aeruginosa pilf
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  GLTPDILDRIYAYAFDYHEKGNITDAEIYYKFLCIYAFENHEYLKDFASVCQPKKKYQQAYDLYKLSYNYFPYDDYSVIY
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Template Sequence  TLYPERSRVFENLGLVSLQXKKPAQAKEYFEKSLRLNRNQPSVALEXADLLYKEREYVPARQYYDLFAQGGG. QNARSLL
Template Known Secondary structure  TT
TTTT

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   1135....1140.........1150.........1160.........1170.........1180.........1190.........1200...... ...1210...
 
   114.....120.........130.........140.........150
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Query Sequence  RMGQCQIGAKNIDNAMQCFYHIINNCEDDSVKSKAQA
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Template Sequence  LGIRLAKVFEDRDTAASYGLQLKRLYPGSLEYQEFQA
Template Known Secondary structure  TT

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   1214.....1220.........1230.........1240.........1250
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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