Job Description Q46787 Confidence 99.66% Date Thu Jan 5 12:34:09 GMT 2012 Rank 35 Aligned Residues 123 % Identity 14% Template c1ihgA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:cyclophilin 40; PDBTitle: bovine cyclophilin 40, monoclinic form Resolution 1.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	L	D	R	I	Y	A	Y	A	F	D	Y	H	E	K	G	N	I	T	D	A	E	I	Y	Y	K	F	L	C	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	F	E	N	H	E	Y	L	K	D	F	A	S	V	C	Q	P	K	K	K	Y	Q	Q	A	Y	D	L	Y	K	L	S	Y
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	S	E	D	L	K	N	I	G	N	T	F	F	K	S	Q	N	W	E	M	A	I	K	K	Y	T	K	V	L	R	Y	V	E	G	S	R	A	A	A	E	D	A	D	G	A	K	L	Q	P	V	A	L	S	C	V	L	N	I	G	A	C	K	L	K	M	S	D	W	Q	G	A	V	D	S	C	L	E	A	L
Template Known Secondary structure																	T	T																							S						G	G	G																		T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	F	P	Y	D	D	Y	S	V	I	Y	R	M	G	Q	C	Q	I	G	A	K	N	I	D	N	A	M	Q	C	F	Y	H	I	I	N	N	C	E	D	D	S	V	K	S	K	A	Q	A	Y	I	E	L	L	N	D	N	S	E	D
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		E	I	D	P	.	S	N	T	K	A	L	Y	R	R	A	Q	G	W	Q	G	L	K	E	Y	D	Q	A	L	A	D	L	K	K	A	Q	E	I	A	P	E	D	K	A	I	Q	A	E	L	L	K	V	K	Q	K	I	K	A	Q	K	D
Template Known Secondary structure		T	T		T	.	T															T	T																	T	T
Template Predicted Secondary structure						.
Template SS confidence
		301	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions