Job Description P0AA49 Confidence 0.77% Date Thu Jan 5 11:11:55 GMT 2012 Rank 47 Aligned Residues 87 % Identity 14% Template d1oedc_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	D	L	L	P	I	I	V	I	M	L	L	G	Y	F	S	G	R	R	E	T	F	S	E	D	Q	A	R	A	F	N	K	L	V	L	N	Y	A	L	P	A	A	L	F	V	S	I	T	R	A	N	R	E	M	I	F	A	D	T	R	L	T	L	V	S	L	V	V	I	V	G	C	F	F	F	S	W	F
Query Conservation
Alig confidence																						.	.	.						.
Template Conservation																						.	.	.						.
Template Sequence		V	I	N	F	I	T	P	C	V	L	I	S	F	L	A	S	L	A	F	Y	.	.	.	L	P	A	E	S	.	G	E	K	M	S	T	A	I	S	V	L	L	A	Q	A	V	F	L	L	L	T	S	Q	R	L	P	E	T	A	L	A	V	P	L	I	G	K	Y	L	M	F	I	M	S	L	V	T	G	V	I	V
Template Known Secondary structure																						.	.	.						.	T	T																														S				T
Template Predicted Secondary structure																						.	.	.						.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	Y	K	F	F	K	R	T	H	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	G	I	V	L	N	F	H	F	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions