Job Description P0AA49 Confidence 1.25% Date Thu Jan 5 11:11:55 GMT 2012 Rank 26 Aligned Residues 136 % Identity 18% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	N	L	S	A	L	I	S	A	A	K	E	P	V	V	W	A	P	V	L	A	T	I	L	V	L	V	G	V	K	I	P	A	A	W	D	P	T	F	N	L	I	A	K	A	N	S	G	V	A	V	F	A	A	G	L	T	L	A	A	H	K	F	E	F	S	A	E	I	A	Y	N	T	F	L	K	L	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q
Template Known Secondary structure				T	T	T	T	T																			T	T	T			S																																	T	S			S							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	A	L	L	L	V	G	M	A	C	H	L	N	S	E	H	L	Q	M	M	V	L	A	G	A	L	P	P	A	F	S	G	I	I	I	A	S	R	F	N	V	Y	T	R	T	G	T	A	S	L	A	V	S	V	L	G	F	V	V	T	A	P	L	W	I	Y	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	L	V	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T	I	V	S	A	M	A	L	S	V	L	V	A	L	I	L	T	P	A	L	C	A	T
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T				T	T	S																						T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		440	.	.	.	.	.	.														.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions