Job Description P0AA49 Confidence 0.84% Date Thu Jan 5 11:11:55 GMT 2012 Rank 38 Aligned Residues 116 % Identity 9% Template c3eamB_ PDB info PDB header:membrane protein, transport protein Chain: B: PDB Molecule:glr4197 protein; PDBTitle: an open-pore structure of a bacterial pentameric ligand-2 gated ion channel Resolution 2.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	D	L	L	P	I	I	V	I	M	L	L	G	Y	F	S	G	R	R	E	T	F	S	E	D	Q	A	R	A	F	N	K	L	V	L	N	Y	A	L	P	A	A	L	F	V	S	I	T	R	A	N	R	E	M	I	F	A	D	T	R	L	T	L	V	S	L	V	V	I	V	G	C	F	F	F	S	W	F
Query Conservation
Alig confidence																																																												.
Template Conservation																																																												.
Template Sequence		I	P	N	I	I	L	P	M	L	F	I	L	F	I	S	W	T	A	F	W	S	T	S	Y	E	A	N	V	T	L	V	V	S	T	L	I	A	H	I	A	F	N	I	L	V	E	T	N	L	P	K	T	P	Y	M	T	Y	T	.	G	A	I	I	F	M	I	Y	L	F	Y	F	V	A	V	I	E	V	T	V	Q
Template Known Secondary structure					T													G	G	G	G																												T	S				S	S					.
Template Predicted Secondary structure																																																												.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	Y	K	F	F	K	R	T	H	A	E	A	A	V	C	A	L	I	A	G	S	P	T	I	G	F	L	G	F	A	V	L	D	P	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Y	L	K	V	E	S	Q	P	A	R	A	A	S	I	T	R	A	S	R	I	A	F	P	V	V	F	L	L	A	N	I	I	L	A	F	L
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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