Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA49
Confidence2.88%DateThu Jan 5 11:11:55 GMT 2012
Rank10Aligned Residues20
% Identity15%Templatec1no7A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:major capsid protein; PDBTitle: structure of the large protease resistant upper domain of2 vp5, the major capsid protein of herpes simplex virus-1
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40........
Predicted Secondary structure 
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Query Sequence  SEDQARAFNKLVLNYALPAA
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Template Sequence  RGADWTVHHKIYYYVMVPAF
Template Known Secondary structure  S
T
Template Predicted Secondary structure 



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   801........810.........820
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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