Job Description Q47153 Confidence 8.23% Date Thu Jan 5 12:36:28 GMT 2012 Rank 97 Aligned Residues 59 % Identity 15% Template c4ktqA_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:protein (large fragment of dna polymerase i); PDBTitle: binary complex of the large fragment of dna polymerase i2 from t. aquaticus bound to a primer/template dna Resolution 2.50 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	M	P	V	T	W	I	Q	A	A	Q	K	A	K	A	L	N	M	G	Y	Q	V	I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E
Query Conservation
Alig confidence																														.	.										.	.	.	.	.	.
Template Conservation																														.	.										.	.	.	.	.	.
Template Sequence		F	G	V	P	R	E	A	V	D	P	L	M	R	R	A	A	K	T	I	N	F	G	V	L	Y	G	M	S	.	.	A	H	R	L	S	Q	E	L	A	.	.	.	.	.	.	I	P	Y	E	E	A	Q	A	F	I	E	R	Y	F	Q	S	F	P	K	V	R	A
Template Known Secondary structure		T			S	T	T		S		T	T													T	T				.	.								T	T	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																														.	.										.	.	.	.	.	.
Template SS confidence
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.			.	.	.	.	.	680	.	.	.							.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions