Job Description Q47153 Confidence 53.72% Date Thu Jan 5 12:36:28 GMT 2012 Rank 6 Aligned Residues 125 % Identity 10% Template c3pl4A_ PDB info PDB header:motor protein Chain: A: PDB Molecule:flagellar motor switch protein; PDBTitle: crystal structure of flig (residue 116-343) from h. pylori Resolution 2.71 Å

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		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V	A	S	S	T	V	T	K	D	H	.	I	L	L	A	A	D
Query Conservation																																																																											.
Alig confidence																																																.	.	.	.	.																							.
Template Conservation																																																.	.	.	.	.
Template Sequence		Q	K	N	F	A	Y	L	G	K	I	K	P	Q	Q	L	A	D	F	I	I	N	E	H	P	Q	T	I	A	L	I	L	A	H	M	E	A	P	N	A	A	E	T	L	S	Y	F	.	.	.	.	.	P	D	E	M	K	A	E	I	S	I	R	M	A	N	L	G	E	I	S	P	Q	V	V	K	R	V	S	T	V
Template Known Secondary structure		T	T	T	T	G	G	G	G	G	S									S	T	T	S											T	S										T	T	S	.	.	.	.	.														T		T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.					480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	K	Q	E	L	T	V	Y	.	.	.	.	T	L	N	N	E	L	E	N	L	L	T	N	V	V	N	Q	A	Q	Q	G	G	K	V	M	L	D	S	V	P	V	D	P	N	M	L	N	Q	F	Q	S	T	M
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	N	K	L	E	S	L	T	S	Y	K	I	E	V	G	G	L	R	A	V	A	E	I	F	N	R	L	G	Q	K	S	A	K	T	T	L	A	R	I	E	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	K	L	A	G	A	I	K	E	M	M
Template Known Secondary structure						S												S											S														T	T	.	.	.	.	.	.	.	.	.	.	.	.	.												T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.														.	.	.	.	.	.	240	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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