Job Description Q47153 Confidence 100.00% Date Thu Jan 5 12:36:28 GMT 2012 Rank 5 Aligned Residues 165 % Identity 16% Template c3lw9B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:invasion protein inva; PDBTitle: structure of a cytoplasmic domain of salmonella inva Resolution 1.85 Å

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		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	S	L	S	L	G	Y	K	L	V	A	L	V	D	K	A	Q	G	N	P	L	T	Q	R	I	R	G	V	R	Q	V	I	S	D	G	N	G	V	L	L	P	E	I	R	I	R	E	N	F	R	L	K	P	S	Q	Y	A	I	F	I	N	G	I	K	A	D	E	A	D	I	P	A	D	K	L	M	A	L	P
Query Conservation
Alig confidence																			.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.
Template Sequence		P	L	I	L	L	V	P	K	S	R	R	E	D	L	E	K	A	.	.	.	.	.	.	Q	L	A	E	R	X	R	S	Q	F	F	I	D	Y	G	V	R	L	P	E	V	L	L	R	D	G	E	G	L	D	D	N	S	I	V	L	L	I	N	E	I	R	V	E	Q	F	T	V	Y	F	D	L	X	R	V	V	N
Template Known Secondary structure																		T	.	.	.	.	.	.	T														S					S							T	T			T	T							T	T										T	T	S				T	T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.							.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	E	T	Y	G	E	I	D	G	V	Q	G	N	D	P	A	Y	G	M	P	V	T	W	I	Q	A	A	Q	K	A	K	A	L	N	M	G	Y	Q	V	I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	D	E	V	V	S	F	G	I	N	P	T	I	H	Q	Q	G	S	S	Q	Y	F	W	V	T	H	E	E	G	E	K	L	R	E	X	G	Y	V	L	R	N	A	L	D	E	L	Y	H	C	L	A	V	T	L	A	R	N	V	N	E	Y	F	G	I	Q	E	T	K	H	X	L	D	Q	L	E	A	K	F	P
Template Known Secondary structure				T					T	T									S	S																T	T	T																																								S
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		403	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	A	E	D	L	S	A	A	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	L	K	E	V	L	R	H	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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