Job Description Q47153 Confidence 23.88% Date Thu Jan 5 12:36:28 GMT 2012 Rank 22 Aligned Residues 140 % Identity 15% Template c3hjlA_ PDB info PDB header:proton transport Chain: A: PDB Molecule:flagellar motor switch protein flig; PDBTitle: the structure of full-length flig from aquifex aeolicus Resolution 2.40 Å

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		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V	A
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		T	L	A	E	K	F	R	G	I	L	E	L	G	D	A	E	K	I	L	K	E	I	E	K	V	D	S	R	I	L	A	S	L	L	K	N	E	H	P	Q	T	I	A	L	F	L	S	Q	L	S	P	K	K	S	A	E	I	I	Q	N	L	.	.	.	.	.	P	E	E	L	K	K	E	V	V	K	R	I	A	T
Template Known Secondary structure																									T	S										T	T	S										T	T	S											T	S	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.	.	.
		444	.	.	.	.	.	450	.		.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480						.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure										.																														.	.	.	.	.
Query SS confidence										.																														.	.	.	.	.
Query Sequence		S	S	T	V	T	K	D	H	.	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	K	Q	E	L	T	V	Y	T	.	.	.	.	.	L	N	N	E	L	E	N	L	L	T	N	V	V	N	Q	A	Q	Q	G	G	K	V	M	L	D	S	V	P	V	D	P	N	M	L	N	Q	F
Query Conservation										.																														.	.	.	.	.
Alig confidence										.																														.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	N	V	N	V	Q	Y	V	K	E	L	A	Q	I	L	L	E	E	I	S	S	L	G	A	K	E	A	L	K	L	E	G	T	A	V	A	A	E	L	L	N	T	L	D	K	E	T	R	E	L	I	L	Q	S	I	G	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	L	L	E	E	R	I
Template Known Secondary structure			S																										S																S																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.														.	.	.	.	.	230	.	.
		518	.	520	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	K	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions