Job Description Q47153 Confidence 14.89% Date Thu Jan 5 12:36:28 GMT 2012 Rank 41 Aligned Residues 110 % Identity 14% Template c3cfyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus Resolution 2.50 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.									.
Predicted Secondary structure																																																	.																								.	.	.	.	.	.	.	.
Query SS confidence																																																	.																								.	.	.	.	.	.	.	.
Query Sequence		V	I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	.	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	.	.	.	.	.	.	.	.	R
Query Conservation																																																	.																								.	.	.	.	.	.	.	.
Alig confidence																																														.	.		.																								.	.	.	.	.	.	.	.
Template Conservation																																														.	.
Template Sequence		L	V	E	D	S	T	S	L	A	I	L	Y	K	Q	Y	V	K	D	E	P	Y	D	I	F	H	V	E	T	G	R	D	A	I	Q	F	I	E	R	S	K	P	Q	L	I	.	.	I	L	D	L	K	L	P	D	M	S	G	E	D	V	L	D	W	I	N	Q	N	D	I	P	T	S	V	I	I	A	T	A	H	G
Template Known Secondary structure					S		T	T									T	T	T	S	S	S						S	S														S			.	.				S	B		S	S	S	B											T	T										S	S
Template Predicted Secondary structure																																														.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		433	.	.	.	.	.	.	440	.	.					.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		D	I	V	T	I	A	T	V	L	V	.	.	.	.	A	S	S	T	V	T	K	D	H	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	K
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		S	V	D	L	A	V	N	L	I	Q	K	G	A	E	D	F	L	E	K	P	I	N	A	D	R	L	K	T	S	V	A	L	H	L	K	R	A	K	L	E	D	L	V	E	G
Template Known Secondary structure												T	T		S					S	S																						T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions