Job Description Q47153 Confidence 15.02% Date Thu Jan 5 12:36:28 GMT 2012 Rank 39 Aligned Residues 190 % Identity 9% Template c3a11D_ PDB info PDB header:isomerase Chain: D: PDB Molecule:translation initiation factor eif-2b, delta PDBTitle: crystal structure of ribose-1,5-bisphosphate isomerase from2 thermococcus kodakaraensis kod1 Resolution 2.50 Å

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		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		I	Q	A	A	Q	K	A	K	A	L	N	M	G	Y	Q	V	I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	S	A	A	L	N	Y	S	Q	L	L	K	.	V	Y	R	A	L	L
Query Conservation																																																																											.
Alig confidence																																			.																																								.
Template Conservation																																			.
Template Sequence		V	V	K	E	V	L	E	I	A	E	K	I	K	N	M	E	I	R	G	A	G	K	I	A	R	S	A	A	Y	A	L	Q	L	.	Q	A	E	K	S	K	A	T	N	V	D	E	F	W	K	E	M	K	Q	A	A	K	I	L	F	E	T	R	P	T	A	V	S	L	P	N	A	L	R	Y	V	M	H	R	G	K
Template Known Secondary structure															T	T	S	S		S															.				S					S	T	T																		S	S		S
Template Predicted Secondary structure																																			.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V	A	S	S	T	V	T	K	D	H	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	K	Q	E	L	T	V	Y	T	L	N	N	E	L	E	N	L	L	T	N	V	V	N	Q	A	Q	Q	G	G	K	V	M	L	D
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		I	A	Y	S	S	G	A	D	L	E	Q	L	R	F	V	I	I	N	A	A	K	E	F	I	H	N	S	.	.	.	E	K	A	L	E	R	I	G	E	F	G	A	K	R	I	E	D	G	D	V	I	M	T	H	C	H	S	K	A	A	I	S	V	M	K	T	A	W	E	Q	G	K	D	I	K	V	I	V	T	E
Template Known Secondary structure					T	T	T																						.	.	.		T											T	T			T	T							S															T	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	P	V	D	P	N	M	L	N	Q	F	Q	S	T	M	P	Q	V	K	E	Q	M	K	A	A	G	K	D	P	V	L	L	V	P	P	Q	L	R	P	L	L	A	R
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.							.
Template Conservation			.	.	.	.	.	.	.	.							.
Template Sequence		T	.	.	.	.	.	.	.	.	R	P	K	W	Q	G	.	K	I	T	A	K	E	L	A	S	Y	G	I	P	V	I	Y	V	V	D	S	A	A	R	H	Y	M	K	M
Template Known Secondary structure			.	.	.	.	.	.	.	.	T	T	T	T			.										T	T								G	G	G	T	T	T	T	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.							.
Template SS confidence
		159									160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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