 |
Job Description | Q47153 | Confidence | 15.34% | Date | Thu Jan 5 12:36:28 GMT 2012 |
Rank | 37 | Aligned Residues | 95 |
% Identity | 9% | Template | c2z99A_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:putative uncharacterized protein; |
PDBTitle: crystal structure of scpb from mycobacterium tuberculosis
|
Resolution | 2.30 Å |
|
 |
  |   |
385 | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | N | Y | D | D | I | T | Q | L | H | N | R | L | S | S | T | A | P | R | . |
. |
. |
. |
. |
. |
. |
. |
L | A | E | D | L | S | A | A | L | N | Y | S | Q | L | L | K | V | Y | R | A | L | L | T | E | G | V | S | L | R | D | I | V | T | I | A | T | V | L | V | A | S | S | T | V | T | K | D | H | I | L | L | A | A |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |   |   |
|   | . | . | . | . | . | . | . | . |
|
|   |
|
|   |   |   |
|   |
|   |   |
|   |   |
|
|
|   |
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
Template Sequence |   |
Q | P | V | Y | R | V | A | A | K | L | Q | L | M | A | D | E | L | T | G | R | D | S | G | I | D | L | R | H | T | S | E | G | W | R | M | Y | T | R | A | R | F | A | P | Y | V | E | K | L | L | L | D | G | A | R | T | K | L | T | R | A | A | L | E | T | L | A | V | V | A | Y | R | Q | P | V | T | R | A | R | V | S |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
  |   |
457 | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | V | R | L | A | L | R | R | S | I | T | H | P | F | V | R | K | Q | E | L | T | V | Y |
Query Conservation |   |
  |
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |   |
Template Sequence |   |
A | V | R | G | V | N | V | D | A | V | M | R | T | L | L | A | R | G | L | I | T | E | V |
Template Known Secondary structure |   |
 |  |  | T | S |
|
|  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|