Job Description Q47153 Confidence 100.00% Date Thu Jan 5 12:36:28 GMT 2012 Rank 3 Aligned Residues 332 % Identity 20% Template c2x49A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva Resolution 1.50 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	I	P	L	I	E	P	I	S	L	S	L	G	Y	K	L	V	A	L	V	D	K	A	Q	G	N	P	L	T	Q	R	I	R	G	V	R	Q	V	I	S	D	G	N	G	V	L	L	P	E	I	R	I	R	E	N	F	R	L	K	P	S	Q	Y	A	I	F	I	N	G	I	K	A	D	E	A	D	I	P	A
Query Conservation
Alig confidence																											.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		S	H	M	T	E	T	V	P	L	I	L	L	V	P	K	S	R	R	E	D	L	E	K	A	Q	.	.	.	.	.	.	L	A	E	R	L	R	S	Q	F	F	I	D	Y	G	V	R	L	P	E	V	L	L	R	D	G	E	G	L	D	D	N	S	I	V	L	L	I	N	E	I	R	V	E	Q	F	T	V	Y	F
Template Known Secondary structure							T																		T	T	.	.	.	.	.	.														S	S											T	T			T	T							T	T										T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	M	A	L	P	S	S	E	T	Y	G	E	I	D	G	V	Q	G	N	D	P	A	Y	G	M	P	V	T	W	I	Q	A	A	Q	K	A	K	A	L	N	M	G	Y	Q	V	I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	M	R	V	V	N	Y	S	D	E	V	V	S	F	G	I	N	P	T	I	H	Q	Q	G	S	S	Q	Y	F	W	V	T	H	E	E	G	E	K	L	R	E	L	G	Y	V	L	R	N	A	L	D	E	L	Y	H	C	L	A	V	T	L	A	R	N	V	N	E	Y	F	G	I	Q	E	T	K	H	M	L	D
Template Known Secondary structure		T	S				T	T			T					T	T									T	T																T	T	T																					T	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	S	T	A	P	R	L	A	E	D	L	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V	A	S	S	T	V	T	K	D	H	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	K	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	E	A	K	F	P	D	L	L	K	E	V	L	R	H	A	T	V	Q	R	I	S	E	V	L	Q	R	L	L	S	E	R	V	S	V	R	N	M	K	L	I	M	E	A	L	A	L	W	A	P	R	E	K	D	V	I	N	L	V	E	H	I	R	G	A	M	A	R	Y	I	C	H	K	F	A	N	G	G	E
Template Known Secondary structure					T	T										T	T	S														T	T	T																	T	T	T															T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	Y	T	L	N	N	E	L	E	N	L	L	T	N	V	V	N	Q	A	Q	Q	G	G	K	V	M	L	D	S	V	P	V	D	P	N	M	L	N	Q	F	Q	S	T	M	P	Q	V	K	E	Q	M	K	A	A	G	K	D	P	V	L	L	V	P	P	Q	L	R	P	L	L	A	R	Y	A	R	L	F	A
Query Conservation
Alig confidence																															.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		L	R	A	V	M	V	S	A	E	V	E	D	V	I	R	K	G	I	R	Q	T	S	G	S	T	F	L	S	L	.	.	.	.	.	D	P	E	A	S	A	N	L	M	D	L	I	T	L	K	L	D	D	L	L	I	A	H	K	D	L	V	L	L	T	S	V	D	V	R	R	F	I	K	K	M	I	E	G	R	F
Template Known Secondary structure																							S	S							.	.	.	.	.																	T	T			S		G	G	G							T	T	T									T	T	T
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.						.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	L	H	V	L	S	Y	N	E	V	P	D	E	L	E	L	K	I	M	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	L	E	V	L	S	F	G	E	I	A	D	S	K	S	V	N	V	I	K	T	I
Template Known Secondary structure		T	T						T	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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