Return to main results Retrieve Phyre Job Id

Job DescriptionQ47153
Confidence8.27%DateThu Jan 5 12:36:28 GMT 2012
Rank94Aligned Residues33
% Identity21%Templatec2k1oA_
PDB info PDB header:gene regulationChain: A: PDB Molecule:putative; PDBTitle: nmr structure of helicobacter pylori jhp0511 (hp0564).
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   418.420.........430... ......440.........450
Predicted Secondary structure 



...




Query SS confidence 















. . .
















Query Sequence  LKVYRALLTEGVSLRD. . . IVTIATVLVASSTVTKD
Query Conservation    


 

 
 




...
  




       

Alig confidence 















...
















Template Conservation 



































Template Sequence  HDVLRRLADEEVESVNSFVKRHILKTIIYKKGTNQD
Template Known Secondary structure  TT
S

SS
SS


Template Predicted Secondary structure 





Template SS confidence 



































   35....40.........50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions