Job Description Q47153 Confidence 30.67% Date Thu Jan 5 12:36:28 GMT 2012 Rank 12 Aligned Residues 149 % Identity 17% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	S	A	S	V	I	A	T	H	V	N	K	I	V	R	S	Y	I	P	D	L	F	N	Y	D	D	I	T	Q	L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V
Query Conservation
Alig confidence																					.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	A	V	T	V	A	C	G	F	L	H	D	V	V	E	D	T	D	.	.	.	I	T	L	D	N	I	E	F	.	.	.	D	F	G	K	D	V	R	D	I	V	D	G	V	T	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	K	V	E	S	K	D	I	R	V	I	L	V	K	L	A
Template Known Secondary structure				S									T	T					S	S	.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																					.	.	.									.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.																.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	S	S	T	V	T	K	D	H	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H	P	F	V	R	.	K	Q	E	L	T	V	Y	T	L	N	N	E	L	E	N	L	L	T	N	V	V	N	Q	A	Q	Q	G	G	K	V	M	L	D	S	V	P	V	D	P	N	M	L	N	Q	F	Q	S	T	M
Query Conservation																																.
Alig confidence																																.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	L	H	N	M	R	T	L	K	H	L	R	K	D	K	Q	E	R	I	S	R	E	T	M	E	I	Y	A	P	L	A	H	R	L	G	I	S	R	I	K	W	E	L	E	D	L	A	F	R	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	T	E	F	Y	K	I	S	H	M	M
Template Known Secondary structure									T	G	G	G	S															T								T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																	.	.	.	.	200	.	.	.	.	.	.	.
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	V	K	E	Q	M	K	A	A	G	K	D	P	V	L	L	V	P	P	Q	L	R	P	L	L	A	R	Y	A	R	L	F	A	P	G	L	H	V	L	S
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	E	K	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	T	K	I	K	S	Y	T	T	E	Q	G	L	F	G	D	V	Y	G
Template Known Secondary structure		T						.	.	.	.	.	.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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