Job Description Q47153 Confidence 8.56% Date Thu Jan 5 12:36:28 GMT 2012 Rank 89 Aligned Residues 81 % Identity 10% Template c1j8yF_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:signal recognition 54 kda protein; PDBTitle: signal recognition particle conserved gtpase domain from a.2 ambivalens t112a mutant Resolution 2.00 Å

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		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.			.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.			450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																										.	.
Query SS confidence																		.	.																																										.	.
Query Sequence		L	H	N	R	L	S	S	T	A	P	R	L	A	E	D	L	.	.	S	A	A	L	N	Y	S	Q	L	L	K	V	Y	R	A	L	L	T	E	G	V	S	L	R	D	I	V	T	I	A	T	V	L	V	A	S	S	T	V	T	K	.	.	D	H	I	L	L	A	A	D	V	R	L	A	L	R	R	S	I	T	H
Query Conservation																		.	.																																										.	.
Alig confidence																		.	.																																										.	.
Template Conservation
Template Sequence		L	L	D	N	L	R	D	T	V	R	K	F	L	T	G	S	S	S	Y	D	K	A	V	E	D	F	I	K	E	L	Q	K	S	L	I	S	A	D	V	N	V	K	L	V	F	S	L	T	N	K	I	K	E	R	L	K	N	E	K	P	P	T	Y	I	E	R	R	E	W	F	I	K	I	V	Y	D	E	L	S	N
Template Known Secondary structure															S			S																				T	T																								T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		469	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	V	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	G	G	D
Template Known Secondary structure			T	T		S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions