Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence98.83%DateThu Jan 5 11:27:17 GMT 2012
Rank182Aligned Residues214
% Identity19%Templated2ce7a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.44

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150... ......160.........170.........180.........190.........200..
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Query Sequence  REAIVTRSPLMLRLLEQARLV. . . . . . . . . . AQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLE
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Template Sequence  FKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEAN. . . VPFFHISG. . . . . . . . .
Template Known Secondary structure  GGG

S

TTTT



S

TTSST...

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   160.........170.........180.........190.........200.........210......... 220.......
 
   203......210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  SELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRD. . .
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Template Sequence  SDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFDSKE. . . . GIIVMAATNRPDIL
Template Known Secondary structure  GGTTT

TTT
STGGGT



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GGG....TS
GGGS
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   228.230.........240.........250.........260.........270.........280......... 290.........300...
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  LPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV
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Template Sequence  DPALLRPGRFD. . . . . . . KKIVVDPPDMLGRKK. . . . ILEIHT. . . . . . . . RNKPLAEDVNLEIIAKRTPGFVGADLENL
Template Known Secondary structure 
GGGGSTTSS
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B
TT

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   313......320... ......330........ .340.... .....350.........360.........370...
 
   360....... ..370.........380.
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Query Sequence  IEQCVALT. . . SSPVISDALVEQAL
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Template Sequence  VNEAALLAAREGRDKITMKDFEEAI
Template Known Secondary structure  TT
SSB
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   374.....380.........390........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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