Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence99.72%DateThu Jan 5 11:27:17 GMT 2012
Rank120Aligned Residues207
% Identity21%Templated1um8a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170.........180.........190.........200.........210.........220....
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Query Sequence  RLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVSNREGLF
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Template Sequence  VELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHL. . . DIPIAISDATSLTVENILTRLLQAS. . . . . . . . . . . DWNV
Template Known Secondary structure  TT






TTSST...T

GGG


TT...........TT
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   130.........140.........150.........160...... ...170.........180.........190. ....
 
   225....230.........240.........250.........260.........270.......
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Query Sequence  QAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATH. . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QKAQKGIVFIDEIDKIGEGVQQALLKIVEGSLVNQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAI
Template Known Secondary structure  TTSTGGG






TT


TTTTTS
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S


SS

TTTTTTS
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   204.....210.........220.........230.........240.........250.........260.........270.........280...
 
   278.280.........290.........300.........310.........320.........330.... .....340.........350..
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Query Sequence  . . RDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR. . . AFSTDAMKRLMTASWPGN
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Template Sequence  LHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERK
Template Known Secondary structure  GGG

TT

TT






SSTT
TTT

TT
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   313......320.........330.........340.........350.........360.........370.........380.........390..
 
   353......360.....
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Query Sequence  . . VRQLVNVIEQCVA
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Template Sequence  TGARGLRAIIEDFCL
Template Known Secondary structure 
TGGG
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   393......400.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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