Job Description P0AFU4 Confidence 86.47% Date Thu Jan 5 11:27:17 GMT 2012 Rank 477 Aligned Residues 84 % Identity 13% Template d1r8ja2 SCOP info Flavodoxin-like CheY-like N-terminal domain of the circadian clock protein KaiA Resolution 2.03

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		M	S	H	K	P	A	H	L	L	L	V	D	D	D	P	G	L	L	K	L	L	G	L	R	L	T	S	E	G	Y	S	V	V	T	A	E	S	G	A	E	G	L	R	V	L	N	R	E	K	.	.	V	D	L	V	I	S	D	L	R	M	D	E	M	D	G	M	Q	L	F	A	E	I	Q	K	V	Q	P	G	M
Query Conservation																																																			.	.
Alig confidence						.																																													.	.										.	.
Template Conservation						.																																																								.	.
Template Sequence		V	L	S	Q	.	I	A	I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	.	.	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V
Template Known Secondary structure						.																				T		S	T	T								S											S	T	T	S		S						T	T	.	.	S	T	T											T	T
Template Predicted Secondary structure						.																																																								.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	I	L	T	A	H	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	I	V	V	G	D	R	D
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions