Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence99.10%DateThu Jan 5 11:27:17 GMT 2012
Rank163Aligned Residues222
% Identity18%Templated1njfa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  ERWREAIVTRSPLMLRLLEQARLVAQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHA
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Template Sequence  PQTFADVVGQEHVLTALANGLSL. GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL
Template Known Secondary structure 
SSGGGS
S
T.T


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STTSS
TT
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S
ST

TT
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   12.......20.........30.... .....40.........50.........60.........70.........80.........90
 
   210....... ..220.........230.........240.........250.........260.........270.........
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Query Sequence  RGAFTGAV. . . . . . . . . . SNREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRD
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Template Sequence  IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPP. . . . . . . . . . . EHVKFLLATTDP
Template Known Secondary structure  TT
SSSS


S
SSSSSTGGGS
S

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G
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   91........100.........110.........120.........130.........140....... ..150.........
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  LPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV
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Template Sequence  . . . . . . . QKLPVTILSRCLQFHLKALDVEQ. . . . . . . . IRHQLEHILNEEHI. . . AHEPRALQLLAR. AAEGSLRDALSL
Template Known Secondary structure  .......GGS
TTS




........T
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   160.........170.........180.. .......190...... ...200........ .210.........220
 
   360.........370.........380...
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Query Sequence  IEQCVALTSSPVISDALVEQALEG
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Template Sequence  TDQAIASGDGQ. VSTQAVSAMLGT
Template Known Secondary structure  TTTS.B
T
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   221........230. ........240...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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