Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFU4
Confidence99.26%DateThu Jan 5 11:27:17 GMT 2012
Rank155Aligned Residues200
% Identity19%Templated1d2na_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DERWREAIVTRSPLMLRLLEQARLV. . . . . . . . AQSDVSVLINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQL
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Template Sequence  ASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEES. . . NFPFIKICSPDKMIGF
Template Known Secondary structure  TTT
TT




S
SS
S
STTSS...T
S
GGG
TT
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   508.510.........520.........530.........540.........550.........560........ .570.........580....
 
   201........210.........220.........230.........240 .........250.........260.........270
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Query Sequence  LESELFGHARGAFTGAVSNREGLFQAAEGGTLFLDEIGDM. . . . . . . . . . PAPLQVKLLRVLQERKVRPLGSNRDIDINV
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Template Sequence  SETAKCQAMKKIFD. . . . . . . . DAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLL. . . . . . . . . . KKAPPQGR
Template Known Secondary structure 
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TT
BTTTTB

T..........T


STT
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   585....590........ .600.........610.........620.........630........ .640......
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  RIISATHRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWP
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Template Sequence  KLLIIGTTSRKDVLQEMEMLNAF. . . . . STTIHVPNIATGEQ. . . . . . . . . LLEALELLGNFKDKERTTIAQQVKGKKVW
Template Known Secondary structure  S
TT
TTTS.....S


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TTS
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   647..650.........660......... 670.........680... ......690.........700.........710..
 
   351........360...
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Query Sequence  GNVRQLVNVIEQC
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Template Sequence  IGIKKLLMLIEMS
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   713......720.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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